PICS

Probabilistic inference of ChIP-seq

Bioconductor version: 2.7

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

Author: Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <raph at stat.ubc.ca>

Maintainer: Arnaud Droit <arnaud.droit at ircm.qc.ca>, Xuekui Zhang <xzhang at stat.ubc.ca>, Raphael Gottardo <raph at stat.ubc.ca>

To install this package, start R and enter:

 source("http://bioconductor.org/biocLite.R")
 biocLite("PICS")

To cite this package in a publication, start R and enter:

 citation("PICS")

PDF R Script The PICS users guide

PDF Reference Manual

Depends R(>= 2.11.0), IRanges, GenomicRanges, BSgenome

Imports IRanges, GenomicRanges, BSgenome, methods, graphics, grDevices, stats

System Requirements

License Artistic-2.0

URL

Depends On Me

Imports Me

Suggests Me

Version 1.4.0

Since Bioconductor 2.6 (R-2.11)

Windows Binary PICS_1.4.0.zip (32- & 64-bit)

MacOS 10.5 (Leopard) binary PICS_1.4.0.tgz

Common Bioconductor workflows include:

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