MiChip

MiChip Parsing and Summarizing Functions

Bioconductor version: 2.7

This package takes the MiChip miRNA microarray .grp scanner output files and parses these out, providing summary and plotting functions to analyse MiChip hybridizations. A set of hybridizations is packaged into an ExpressionSet allowing it to be used by other BioConductor packages.

Author: Jonathon Blake <blake at embl.de>

Maintainer: Jonathon Blake <blake at embl.de>

To install this package, start R and enter:

 source("http://bioconductor.org/biocLite.R")
 biocLite("MiChip")

To cite this package in a publication, start R and enter:

 citation("MiChip")

Documentation

PDF R Script MiChip miRNA Microarray Processing
PDF Reference Manual

Details

biocViews Microarray, preprocessing
Depends R (>= 2.3.0), Biobase
Imports Biobase
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.4.0
Since Bioconductor 2.5 (R-2.10)

Package Downloads

Package Source MiChip_1.4.0.tar.gz
Windows Binary MiChip_1.4.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary MiChip_1.4.0.tgz
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