To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

In most cases, you don't need to download the package archive at all.

mosaicsExample

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see mosaicsExample.

Example data for the mosaics package, which implements MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data

Bioconductor version: 2.10

Data for the mosaics package, consisting of chromosome 21 ChIP and control sample data from a ChIP-seq experiment of STAT1 binding, with mappability, GC content, and sequence ambiguity scores of human genome HG18.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

Citation (from within R, enter citation("mosaicsExample")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaicsExample")

Documentation

PDF Reference Manual

Details

biocViews ChIPseqData, ExperimentData, Homo_sapiens
Version 0.99.6
License GPL (>= 2)
Depends R (>= 2.11.1)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://groups.google.com/group/mosaics_user_group
Depends On Me
Imports Me
Suggests Me mosaics
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source mosaicsExample_0.99.6.tar.gz
Windows Binary mosaicsExample_0.99.6.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/mosaicsExample/
Package Downloads Report Download Stats

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