To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

In most cases, you don't need to download the package archive at all.

pathRender

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see pathRender.

Render molecular pathways

Bioconductor version: 2.10

build graphs from pathway databases, render them by Rgraphviz

Author: Li Long <lilong at isb-sib.ch>

Maintainer: Li Long <lilong at isb-sib.ch>

Citation (from within R, enter citation("pathRender")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("pathRender")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("pathRender")
PDF pathRender overview
PDF pathway graphs colored by expression map
PDF Reference Manual
Text NEWS

Details

biocViews GraphsAndNetworks, Software
Version 1.24.0
In Bioconductor since BioC 1.8 (R-2.3) (10 years)
License LGPL
Depends graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods
Imports
LinkingTo
Suggests ALL, hgu95av2.db
SystemRequirements
Enhances
URL http://www.bioconductor.org
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source pathRender_1.24.0.tar.gz
Windows Binary pathRender_1.24.0.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/pathRender/tree/release-2.10
Package Short Url http://bioconductor.org/packages/pathRender/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

AltStyle によって変換されたページ (->オリジナル) /