To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methylumi")
In most cases, you don't need to download the package archive at all.
This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see methylumi.
Bioconductor version: 2.10
This package provides classes for holding and manipulating Illumina methylation data. Based on eSet, it can contain MIAME information, sample information, feature information, and multiple matrices of data. An "intelligent" import function, methylumiR can read the Illumina text files and create a MethyLumiSet. methylumIDAT can directly read raw IDAT files from HumanMethylation27 and HumanMethylation450 microarrays. Normalization, background correction, and quality control features for GoldenGate, Infinium, and Infinium HD arrays are also included.
Author: Sean Davis, Pan Du, Sven Bilke, Tim Triche, Jr., Moiz Bootwalla
Maintainer: Sean Davis <sdavis2 at mail.nih.gov>
Citation (from within R,
enter citation("methylumi")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("methylumi")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("methylumi")
Follow Installation instructions to use this package in your R session.
Documentation »
Bioconductor
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations: