To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MCRestimate")

In most cases, you don't need to download the package archive at all.

MCRestimate

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see MCRestimate.

Misclassification error estimation with cross-validation

Bioconductor version: 2.10

This package includes a function for combining preprocessing and classification methods to calculate misclassification errors

Author: Marc Johannes, Markus Ruschhaupt, Holger Froehlich, Ulrich Mansmann, Andreas Buness, Patrick Warnat, Wolfgang Huber, Axel Benner, Tim Beissbarth

Maintainer: Marc Johannes <m.johannes at dkfz.de>

Citation (from within R, enter citation("MCRestimate")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MCRestimate")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("MCRestimate")
PDF HOW TO use MCRestimate
PDF Reference Manual

Details

biocViews Bioinformatics, Classification, Software
Version 2.12.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License GPL (>= 2)
Depends R (>= 2.7.2), golubEsets(>= 1.4.6)
Imports e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6), RColorBrewer (>= 0.1-3), Biobase(>= 2.5.5), graphics, grDevices, stats, utils
LinkingTo
Suggests xtable (>= 1.2-1), ROC(>= 1.8.0), genefilter(>= 1.12.0), gpls(>= 1.6.0)
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source MCRestimate_2.12.0.tar.gz
Windows Binary MCRestimate_2.12.0.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/MCRestimate/tree/release-2.10
Package Short Url http://bioconductor.org/packages/MCRestimate/
Package Downloads Report Download Stats

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