To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

In most cases, you don't need to download the package archive at all.

LiquidAssociation

This package is for version 2.10 of Bioconductor; for the stable, up-to-date release version, see LiquidAssociation.

LiquidAssociation

Bioconductor version: 2.10

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("LiquidAssociation")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("LiquidAssociation")
PDF LiquidAssociation Vignette
PDF Reference Manual

Details

biocViews Bioinformatics, CellBiology, GeneExpression, Genetics, Pathways, Software, TimeCourse
Version 1.10.0
In Bioconductor since BioC 2.5 (R-2.10) (6.5 years)
License GPL (>=3)
Depends geepack, methods, yeastCC, org.Sc.sgd.db
Imports Biobase, graphics, grDevices, methods, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source LiquidAssociation_1.10.0.tar.gz
Windows Binary LiquidAssociation_1.10.0.zip
Mac OS X 10.6 (Snow Leopard)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/LiquidAssociation/tree/release-2.10
Package Short Url http://bioconductor.org/packages/LiquidAssociation/
Package Downloads Report Download Stats

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