Proceedings of the 15th Workshop on Biomedical Natural Language Processing

Kevin Bretonnel Cohen, Dina Demner-Fushman, Sophia Ananiadou, Jun-ichi Tsujii (Editors)

Anthology ID:
W16-29
Month:
August
Year:
2016
Address:
Berlin, Germany
Venues:
BioNLP | WS
Events:
Biomedical Natural Language Processing Workshop (2016) | Other Workshops and Events (2016)
SIG:
SIGBIOMED
Publisher:
Association for Computational Linguistics
URL:
https://aclanthology.org/W16-29/
DOI:
10.18653/v1/W16-29
Bib Export formats:
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PDF:
https://aclanthology.org/W16-29.pdf
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Proceedings of the 15th Workshop on Biomedical Natural Language Processing
Kevin Bretonnel Cohen | Dina Demner-Fushman | Sophia Ananiadou | Jun-ichi Tsujii
A Machine Learning Approach to Clinical Terms Normalization
José Castaño | María Laura Gambarte | Hee Joon Park | Maria del Pilar Avila Williams | David Pérez | Fernando Campos | Daniel Luna | Sonia Benítez | Hernán Berinsky | Sofía Zanetti
Improved Semantic Representation for Domain-Specific Entities
Mohammad Taher Pilehvar | Nigel Collier
Identification, characterization, and grounding of gradable terms in clinical text
Chaitanya Shivade | Marie-Catherine de Marneffe | Eric Fosler-Lussier | Albert M. Lai
Graph-based Semi-supervised Gene Mention Tagging
Golnar Sheikhshab | Elizabeth Starks | Aly Karsan | Anoop Sarkar | Inanc Birol
Feature Derivation for Exploitation of Distant Annotation via Pattern Induction against Dependency Parses
Dayne Freitag | John Niekrasz
Inferring Implicit Causal Relationships in Biomedical Literature
Halil Kilicoglu
SnapToGrid: From Statistical to Interpretable Models for Biomedical Information Extraction
Marco A. Valenzuela-Escárcega | Gus Hahn-Powell | Dane Bell | Mihai Surdeanu
Character based String Kernels for Bio-Entity Relation Detection
Ritambhara Singh | Yanjun Qi
Disambiguation of entities in MEDLINE abstracts by combining MeSH terms with knowledge
Amy Siu | Patrick Ernst | Gerhard Weikum
Using Distributed Representations to Disambiguate Biomedical and Clinical Concepts
Stéphan Tulkens | Simon Suster | Walter Daelemans
Unsupervised Document Classification with Informed Topic Models
Timothy Miller | Dmitriy Dligach | Guergana Savova
Vocabulary Development To Support Information Extraction of Substance Abuse from Psychiatry Notes
Sumithra Velupillai | Danielle L. Mowery | Mike Conway | John Hurdle | Brent Kious
Syntactic analyses and named entity recognition for PubMed and PubMed Central — up-to-the-minute
Kai Hakala | Suwisa Kaewphan | Tapio Salakoski | Filip Ginter
Improving Temporal Relation Extraction with Training Instance Augmentation
Chen Lin | Timothy Miller | Dmitriy Dligach | Steven Bethard | Guergana Savova
Using Centroids of Word Embeddings and Word Mover’s Distance for Biomedical Document Retrieval in Question Answering
Georgios-Ioannis Brokos | Prodromos Malakasiotis | Ion Androutsopoulos
Measuring the State of the Art of Automated Pathway Curation Using Graph Algorithms - A Case Study of the mTOR Pathway
Michael Spranger | Sucheendra Palaniappan | Samik Gosh
Construction of a Personal Experience Tweet Corpus for Health Surveillance
Keyuan Jiang | Ricardo Calix | Matrika Gupta
Modelling the Combination of Generic and Target Domain Embeddings in a Convolutional Neural Network for Sentence Classification
Nut Limsopatham | Nigel Collier
PubTermVariants: biomedical term variants and their use for PubMed search
Lana Yeganova | Won Kim | Sun Kim | Rezarta Islamaj Doğan | Wanli Liu | Donald C Comeau | Zhiyong Lu | W John Wilbur
This before That: Causal Precedence in the Biomedical Domain
Gus Hahn-Powell | Dane Bell | Marco A. Valenzuela-Escárcega | Mihai Surdeanu
Syntactic methods for negation detection in radiology reports in Spanish
Viviana Cotik | Vanesa Stricker | Jorge Vivaldi | Horacio Rodriguez
How to Train good Word Embeddings for Biomedical NLP
Billy Chiu | Gamal Crichton | Anna Korhonen | Sampo Pyysalo
An Information Foraging Approach to Determining the Number of Relevant Features
Brian Connolly | Benjamin Glass | John Pestian
Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiology Reports to Referring Physicians
Brian E. Chapman | Danielle L. Mowery | Evan Narasimhan | Neel Patel | Wendy Chapman | Marta Heilbrun
Building a dictionary of lexical variants for phenotype descriptors
Simon Kocbek | Tudor Groza
Applying deep learning on electronic health records in Swedish to predict healthcare-associated infections
Olof Jacobson | Hercules Dalianis
Identifying First Episodes of Psychosis in Psychiatric Patient Records using Machine Learning
Genevieve Gorrell | Sherifat Oduola | Angus Roberts | Tom Craig | Craig Morgan | Rob Stewart
Relation extraction from clinical texts using domain invariant convolutional neural network
Sunil Sahu | Ashish Anand | Krishnadev Oruganty | Mahanandeeshwar Gattu

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