limma


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limma

(ˈlɪmə)
n
any of several musical intervals of small size, such as a semitone
Collins English Dictionary – Complete and Unabridged, 12th Edition 2014 © HarperCollins Publishers 1991, 1994, 1998, 2000, 2003, 2006, 2007, 2009, 2011, 2014
References in periodicals archive ?
limma powers differential expression analyses for RNA-sequencing and microarray studies.
Association of Arsenic Exposure with Whole Blood DNA Methylation: An Epigenome-Wide Study of Bangladeshi Adults
DEGs of AR were identified by the limma package following the process of linear model, contrast model, and DEGs selection.
LCK as a Potential Therapeutic Target for Acute Rejection after Kidney Transplantation: A Bioinformatics Clue
Smyth, "Limma: linear models for microarray data," Bioinformatics and Computational Biology Solution Using R and Bioconductor, Springer, Berlin, Germany, 2005.
Microarray Analysis of the Molecular Mechanism Involved in Parkinson's Disease
For each experimental factor combination item, concentration and post-exposure, a model to estimate the treatment effect was fitted with LIMMA (Smyth, 2004) by including the covariate exposure run as a blocking variable to account for the pairing during an exposure run (exposed vs.
3-D nasal cultures: systems toxicological assessment of a candidate modified-risk tobacco product
Finally, the limma package in R [13] was used to identify significant DEGs in the POAG ONH and normal ONH samples.
Gene Expression Profiling of the Optic Nerve Head of Patients with Primary Open-Angle Glaucoma
After variance-stabilizing transformation and normalization with the robust spline normalization method in the package lumi of R, differential analysis was performed using package limma for the following groups: (1) 20 [micro]M versus untreated control; (2) 300 [micro]M versus untreated.
Effects of Propofol Treatment in Neural Progenitors Derived from Human-Induced Pluripotent Stem Cells
The obtained counts were analyzed using the "limma" package (implemented in R environment) specially developed for whole-transcriptome analyses of differentially expressed genes [27].
Molecular Genetic Analysis of Human Endometrial Mesenchymal Stem Cells That Survived Sublethal Heat Shock
R package 'limma' was used to normalize and qualify microarray images.
Identification of gene expression signatures in the chicken intestinal intraepithelial lymphocytes in response to herb additive supplementations