PSEUDOBASE DATA: PKB233-PRRSV-LV

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PRRSV-LV
PKB-number: PKB233
Definition: ORF1a/ORF1b (polymerase) ribosomal frameshift site
Organism: Porcine reproductive and respiratory syndrome virus, European Lelystad strain (LV)
Abbreviation: PRRSV-LV
RNA type: Viral Frameshift
Keywords: arterivirus; ribosomal frameshifting; polymerase
EMBL number: M96262
Submitted by: A.P. Gultyaev ( gultyaev@rulsfb.LeidenUniv.nl)
Supported by: Sequence comparison
References: [1] Meulenberg J.J.M. et al. (1993). Virology 192:62-72.
Stem sizes:
Loop sizes: 12 7
4 0 15
Position Paired:
7402-7407; 7432-7437
7409-7414; 7426-7431
7419-7425; 7453-7459
Bracket view of structure:
 7390 7400 7410 7420 7430 7440 7450 7460
 # |123456789|123456789|123456789|123456789|123456789|123456789|123456789|
 $ 7390 UUUAAACUGUUAGCCGCCAGCGGCUUGACCCGCUGUGGCCGCGGCGGCCUAGUUGUGACUGAAACGGCGGU=7460
 % 7390 ::::::::::::((((((:((((((::::[[[[[[[)))))))))))):::::::::::::::]]]]]]]:

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© final design and maintenance: F.H.D.(Eke) van Batenburg; 2001年5月22日 PKB00233.html

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