C. glabrata PEP4/CAGL0M02211g Summary

Last curated 2018年02月28日
See the Literature Guide for most recent publications.

Help

Summary
Locus History Literature Gene Ontology Phenotype Homologs Protein
PEP4 BASIC INFORMATION [ View References ]
Standard Name PEP41
Systematic Name, Reference Strain CAGL0M02211g (C. glabrata CBS138)
Alias CAGL-IPF6391, CAGL-CDS2671.1, CAG62418.1, GVI51_M021232
Feature Type ORF, Uncharacterized
Description Putative aspartyl protease Saccharopepsin precursor; expression upregulated in biofilm vs planktonic cell culture (1, 3)
Literature
Orthologous genes in Candida species C. parapsilosis CDC317 Ortholog(s) : CPAR2_105130
C. dubliniensis CD36 Ortholog(s) : Cd36_21670
C. albicans SC5314 Ortholog(s) : C2_07400C_A/APR1
View ortholog cluster : 18 genes among 18 Candida-related species/strains
Ortholog(s) in non-CGD species A. nidulans (pepE) ; N. crassa (pep4) ; S. cerevisiae (PEP4)
Best hits in Candida species C. auris B8441 best hit(s) : B9J08_00436
JBrowse

JBrowse for feature CAGL0M02211g

AltStyle によって変換されたページ (->オリジナル) /

GO Annotations View all PEP4 GO evidence and references

Molecular Function
Computational * aspartic-type endopeptidase activity (IEA with EBI: Saccharopepsin, EBI: Aspartic peptidase A1 family, EBI: Aspartic peptidase, active site)

Biological Process
Computational * proteolysis (IEA with EBI: Aspartic peptidase A1 family, EBI: Aspartic peptidase, active site)

Cellular Component
Manually curated * cellular_component unknown (ND)
Mutant Phenotype View all PEP4 Phenotype details and references
Large-scale survey
null * viable

Sequence Information ChrM_C_glabrata_CBS138:275247 to 274000 | JBrowse
Note: this feature is encoded on the Crick strand.
Last UpdateCoordinates: 2022年08月29日 | Sequence: 2022年08月29日

Subfeature Details
Relative
Coordinates		Chromosomal
Coordinates		Most Recent Update
CoordinatesSequence
5' UTR -88to-1275,335to275,2482022年08月29日2022年08月29日
CDS 1to1248275,247to274,0002022年08月29日2022年08月29日
3' UTR 1249to1634273,999to273,6142022年08月29日2022年08月29日

Retrieve Sequences
Sequence Analysis Tools
Maps & Displays
Sequence Information ChrM_C_glabrata_CBS138:275247 to 274000 | JBrowse
Note: this feature is encoded on the Crick strand.
External Links CGOB | FungiDB | GenBank (1, 2) | Genolevures | InterPro (1, 2, 3, 4) | QuickGO | TrEMBL
Primary CGDID CAL0137063
ADDITIONAL INFORMATION for PEP4
Locus History Gene/Sequence Resources
LOCUS SUMMARY NOTES for PEP4 (Last Updated: 2010年10月21日)
inference : similar to AA sequence:UniProtKB:P07267
note : similar to uniprot|P07267 Saccharomyces cerevisiae YPL154c PEP4 aspartyl protease Saccharopepsin precursor
REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for PEP4]
1) Schmidt P, et al. (2008) Proteomic analysis of the pH response in the fungal pathogen Candida glabrata. Proteomics 8(3):534-44
CGD Papers Entry Pubmed Entry Reference LINKOUT
2) Xu Z, et al. (2021) De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays Mol Microbiol 113:1209-1224
CGD Papers Entry Pubmed Entry Web Supplement Data
3) Seneviratne CJ, et al. (2010) Proteomics of drug resistance in Candida glabrata biofilms. Proteomics 10(7):1444-54
CGD Papers Entry Pubmed Entry Reference LINKOUT

Return to CGD