C. albicans PGA27/C2_00800C Summary

Last curated 2014年06月25日
See the Literature Guide for most recent publications.

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Summary
Locus History Literature Gene Ontology Phenotype Homologs Protein
PGA27 BASIC INFORMATION [ View References ]
Standard Name PGA271
Systematic Name, Reference Strain C2_00800C_A (C. albicans SC5314)
Assembly 19/21 Identifier orf19.2044
Alias orf19.9592, IPF25252.12 , IPF7451.22 , Contig4-3065_00303 , orf6.59834 , CA36532 , CaO19.95925 , CaO19.20445 , IPF74512 , orf19.2044, C2_00800C_B, C2_00800C
Feature Type ORF, Uncharacterized
Description Putative GPI-anchored protein (1)
Literature
Name Description Predicted Gpi-Anchored1
Allele Name C2_00800C_B
Allelic Variation Non-synonymous variation between alleles
CUG Codons C2_00800C_A: 1
C2_00800C_B: 2
Systematic Names Used in Other Strains CAWG_03859 (C. albicans WO-1)
Orthologous genes in Candida species C. dubliniensis CD36 Ortholog(s) : Cd36_15740
C. parapsilosis CDC317 Ortholog(s) : CPAR2_212990
View ortholog cluster : 13 genes among 13 Candida-related species/strains
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JBrowse for feature C2_00800C_A

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GO Annotations View all PGA27 GO evidence and references

Molecular Function
Manually curated * molecular_function unknown (ND)

Biological Process
Manually curated * biological_process unknown (ND)

Cellular Component
High-throughput * cell surface (ISS)
Mutant Phenotype View all PGA27 Phenotype details and references
Classical genetics
homozygous null * viable

Large-scale survey
heterozygous null * invasive growth: decreased

null * viable

repressible * vegetative growth: normal rate
* viable

Sequence Information Ca22chr2A_C_albicans_SC5314:137634 to 136177 | JBrowse
Note: this feature is encoded on the Crick strand.
Last UpdateCoordinates: 2014年06月24日 | Sequence: 2014年06月24日

Subfeature Details
Relative
Coordinates		Chromosomal
Coordinates		Most Recent Update
CoordinatesSequence
CDS 1to1458137,634to136,1772014年06月24日2014年06月24日

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Sequence Analysis Tools
Maps & Displays
Sequence Information Ca22chr2A_C_albicans_SC5314:137634 to 136177 | JBrowse
Note: this feature is encoded on the Crick strand.
Allele Location
Allele C2_00800C_B 		Ca22chr2B_C_albicans_SC5314:137642 to 136185 | JBrowse
Note: this feature is encoded on the Crick strand.
Last UpdateCoordinates: 2014年06月24日 | Sequence: 2014年06月24日

Subfeature Details
Relative
Coordinates		Chromosomal
Coordinates		Most Recent Update
CoordinatesSequence
CDS 1to1458137,642to136,1852014年06月24日2014年06月24日

Allele Location
Allele C2_00800C_B Ca22chr2B_C_albicans_SC5314:137642 to 136185 | JBrowse
Note: this feature is encoded on the Crick strand.
External Links CGOB | Entrez Gene (1, 2) | Fungal Orthologs | FungiDB | GenBank (1, 2, 3, 4, 5, 6) | Non-periodic Expression | Pedant | PhylomeDB | SwissProt | Transcription Modules
Primary CGDID CAL0000194687
ADDITIONAL INFORMATION for PGA27
Gene/Sequence Resources
REFERENCES CITED ON THIS PAGE [View Complete Literature Guide for PGA27]
1) De Groot PW, et al. (2003) Genome-wide identification of fungal GPI proteins. Yeast 20(9):781-96
CGD Papers Entry Pubmed Entry Reference LINKOUT Web Supplement Data
2) CandidaDB
CGD Papers Entry
3) Berman J (2005) Mapping of ORFs in Assembly 4 to those in Assembly 19.
CGD Papers Entry
4) CGD (2005) CGD comparison of orf6 and orf19 predicted protein products.
CGD Papers Entry
5) Maglott D, et al. (2007) Entrez Gene: gene-centered information at NCBI. Nucleic Acids Res 35(Database issue):D26-31
CGD Papers Entry Pubmed Entry Reference LINKOUT Reference LINKOUT Reference LINKOUT Reference LINKOUT Reference LINKOUT

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