Galaxy Screencasts and Demos

• Getting Started
• Using Galaxy
• Analysis
• Tutorials
• Interval Operations tutorial
• Developers How To
• Archives

Screencasts are one of several ways to learn how to use Galaxy. These video tutorials cover many aspects of Galaxy, from simple tasks like uploading data, to complex analysis.

Browse the screencasts at http://vimeo.com/galaxyproject.

Getting Started

• Galaxy 101

Using Galaxy

Analysis

Tutorials

• Using UCSC from Galaxy
• Sequences as Tab Delimited Data
• Filtering Data
• Grouping
• Intervals
• Joining Features
• http://screencast.g2.bx.psu.edu/MAF_alignExtractStitch/Stitching Multiple Alignments
• Filtering Multiple Alignments and Converting Formats
• Manipulation of Multiple Alignments
• Sharing your work
• Create workflow from history
• Create workflow from Scratch
• Import Workflow
• Edit Workflow
• Convert Workflow in a Tool
• Extracting Sequences and Alignments
• Basic FASTQ Manipulation
• Advanced FASTQ Manipulation
• Copy History Items
• BioMart

Interval Operations tutorial

Also see Learn/Interval Operations.

• Preparing Data
• Intersect and Subtract
• Merge and Concatenate
• Base Coverage and Compliment
• Feature Coverage
• Finding Clusters
• Joining Features

Developers How To

• Tool integration
• Galaxy in the Cloud using AWS
• Getting Started with the CloudMan Platform Using BioCloudCentral
• PDC Cloud Screencast for using Galaxy on Amazon AWS with SNIC Accounts - Created by the SNIC/PDC group. Generic, non-SNIC content starts at 2:00 in.

Archives

• Current Protocols in BioInformatics - Galaxy: Interactive Analyses of Genomic Data by Example
• Screencasts detailing analysis of data generated by Affymetrix tiling arrays