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Example MolecularSequence/molecularsequence-focus-example (XML)

Raw XML (canonical form + also see XML Format Specification)

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Example of focus (the mother was sequenced) versus subject (a child is the patient of record) (id = "molecularsequence-focus-example")

<?xml version="1.0" encoding="UTF-8"?>
<MolecularSequence xmlns="http://hl7.org/fhir"><id value="molecularsequence-focus-example"/><text ><status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p ><b >Generated Narrative: MolecularSequence</b><a name="molecularsequence-focus-example"></a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border:
 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource MolecularSequence &quot;molecularsequence-focus-example&quot; </p></div><p ><b >type</b>: dna</p><p ><b >subject</b>: <a href="broken-link.html">Patient/infant</a></p><p ><b >focus</b>: <a href="patient-example-infant-mom.html">Patient/infant-mom</a> &quot;Leia SOLO&quot;</p><blockquote ><p ><b >relative</b></p><p ><b >coordinateSystem</b>: 0-based interval counting <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#LA30100-4)</span></p><h3 >StartingSequences</h3><table class="grid"><tr ><td >-</td><td ><b >Sequence[x]</b></td><td ><b >WindowStart</b></td><td ><b >WindowEnd</b></td></tr><tr ><td >*</td><td >NC_000007.14 <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (#NC_000007.14)</span></td><td >87627610</td><td >87627635</td></tr></table><h3 >Edits</h3><table class="grid"><tr ><td >-</td><td ><b >Start</b></td><td ><b >End</b></td><td ><b >ReplacementSequence</b></td><td ><b >ReplacedSequence</b></td></tr><tr ><td >*</td><td >87627621</td><td >87642522</td><td >T</td><td >A</td></tr></table></blockquote></div></text><type value="dna"/><subject ><reference value="Patient/infant"/></subject><focus ><reference value="Patient/infant-mom "/></focus><relative ><coordinateSystem ><coding ><system value="http://loinc.org"/><code value="LA30100-4"/><display value="0-based interval counting"/></coding></coordinateSystem><startingSequence ><sequenceCodeableConcept ><coding><systemvalue="http://www.ncbi.nlm.nih.gov/nuccore/"/><codevalue="NC_000007.14"/></coding><textvalue="NC_000007.14"/></sequenceCodeableConcept><windowStart value="87627610"/><windowEnd value="87627635"/></startingSequence><edit ><start value="87627621"/><end value="87642522"/><replacementSequence value="T"/><replacedSequence value="A"/></edit></relative></MolecularSequence>

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.

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