This page is part of the FHIR Specification (v5.0.0: R5 - STU). This is the current published version. For a full list of available versions, see the Directory of published versions . Page versions: R5 R4B R4 R3
Raw XML (canonical form + also see XML Format Specification)
Example of a record with 1-based coordinatesystem (id = "coord-1-base")
<?xml version="1.0" encoding="UTF-8"?> <MolecularSequence xmlns="http://hl7.org/fhir"><id value="coord-1-base"/><text ><status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p ><b >Generated Narrative: MolecularSequence</b><a name="coord-1-base"></a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource MolecularSequence "coord-1-base" </p></div><p ><b >type</b>: dna</p><blockquote ><p ><b >relative</b></p><p ><b >coordinateSystem</b>: 1-based character counting <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="https://loinc.org/">LOINC</a>#LA30102-0)</span></p><h3 >StartingSequences</h3><table class="grid"><tr ><td >-</td><td ><b >Sequence[x]</b></td><td ><b >WindowStart</b></td><td ><b >WindowEnd</b></td><td ><b >Strand</b></td></tr><tr ><td >*</td><td >ACGTAGTC</td><td >1</td><td >8</td><td >watson</td></tr></table><blockquote ><p ><b >edit</b></p><p ><b >start</b>: 2</p><p ><b >end</b>: 3</p><p ><b >replacementSequence</b>: ATG</p><p ><b >replacedSequence</b>: -</p></blockquote><blockquote ><p ><b >edit</b></p><p ><b >start</b>: 5</p><p ><b >end</b>: 5</p><p ><b >replacementSequence</b>: T</p><p ><b >replacedSequence</b>: A</p></blockquote><blockquote ><p ><b >edit</b></p><p ><b >start</b>: 7</p><p ><b >end</b>: 7</p><p ><b >replacementSequence</b>: -</p><p ><b >replacedSequence</b>: T</p></blockquote></blockquote></div></text><type value="dna"/><relative ><coordinateSystem ><coding ><system value="http://loinc.org"/><code value="LA30102-0"/><display value="1-based character counting"/></coding></coordinateSystem><startingSequence ><sequenceString value="ACGTAGTC"/><windowStart value="1"/><windowEnd value="8"/><strand value="watson"/></startingSequence><edit ><start value="2"/><end value="3"/><replacementSequence value="ATG"/><replacedSequence value="-"/></edit><edit ><start value="5"/><end value="5"/><replacementSequence value="T"/><replacedSequence value="A"/></edit><edit ><start value="7"/><end value="7"/><replacementSequence value="-"/><replacedSequence value="T"/></edit></relative></MolecularSequence>
Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.