Specimen-example-isolate.xml

Bacterial Isolate from Stool sample (id = "isolate")

<?xml version="1.0" encoding="UTF-8"?>
<Specimen xmlns="http://hl7.org/fhir"><id value="isolate"/><!-- text>
 <status value="generated" />
 <div xmlns="http://www.w3.org/1999/xhtml">[Put rendering here]</div>
 </text> --><text ><status value="generated"/><div xmlns="http://www.w3.org/1999/xhtml"><p ><b >Generated Narrative with Details</b></p><p ><b >id</b>: isolate</p><p ><b >contained</b>: </p><p ><b >accessionIdentifier</b>: X352356-ISO1</p><p ><b >status</b>: available</p><p ><b >type</b>: Bacterial isolate specimen <span >(Details : {SNOMED CT code '429951000124103' = 'Bacterial isolate specimen (specimen)',
 given as 'Bacterial isolate specimen'})</span></p><p ><b >subject</b>: <a >Patient/example</a></p><p ><b >receivedTime</b>: 18/08/2015 7:03:00 AM</p><p ><b >parent</b>: id: stool; X352356; status: unavailable; Stool specimen <span >(Details : {SNOMED CT code '119339001' = 'Stool specimen', given as 'Stool specimen'})</span>; receivedTime: 16/08/2015 7:03:00 AM</p><h3 >Collections</h3><table ><tr ><td >-</td><td ><b >Collector</b></td><td ><b >Collected[x]</b></td><td ><b >Method</b></td></tr><tr ><td >*</td><td ><a >Practitioner/f202</a></td><td >16/08/2015 7:03:00 AM</td><td >Plates, Blood Agar <span >(Details : {http://terminology.hl7.org/CodeSystem/v2-0488 code 'BAP' = 'Plates, Blood
 Agar)</span></td></tr></table><p ><b >note</b>: Patient dropped off specimen</p></div></text><contained ><Specimen><id value="stool"/><accessionIdentifier ><!-- accession identifier - e.g. assigned by the labaratory when it is received.
 This is common, unlike specimen identifier --><system value="http://lab.acme.org/specimens/2015"/><value value="X352356"/></accessionIdentifier><status value="unavailable"/><type ><!-- 
 Type is a loosely defined field because there is such a lot of variation in how it
 is used.
 The principal variation is how much information that could be represented elsewhere
 is also
 represented here. For instance, here's some possible types:
 lithium heparin plasma (+ .container.additive) (e.g. SNOMED CT 446272009)
 transfusion bag of blood (+ container.type)
 Peritoneal lavage (+ collection.bodySite)
 If the type includes other fields, it would be normal not to populate the other fields
 Note that this practice is so widespread that it's pointless to try and stop it 
 --><coding ><system value="http://snomed.info/sct"/><code value="119339001"/><display value="Stool specimen"/></coding></type><subject ><referencevalue="Patient/example "/></subject><receivedTime value="2015年08月16日T07:03:00Z"/><collection ><collector ><!-- in practice, collecter is almost always recorded --><displayvalue="Patient"/></collector><!-- the time of collection is usually required. Usually a point in time, but can be a
 period 
 (collectedPeriod) if it's a timed collection (e.g. a 24 hour urine) --><collectedDateTime value="2011年08月16日T06:15:00Z"/><!-- method is usually implied by type --><method ><coding ><system value="http://terminology.hl7.org/CodeSystem/v2-0488"/><code value="LNV"/></coding></method></collection></Specimen></contained><accessionIdentifier ><system value="http://lab.acme.org/specimens/2011"/><value value="X352356-ISO1"/></accessionIdentifier><status value="available"/><type ><coding ><system value="http://snomed.info/sct"/><code value="429951000124103"/><display value="Bacterial isolate specimen"/></coding></type><subject ><referencevalue="Patient/example "/></subject><receivedTime value="2015年08月18日T07:03:00Z"/><parent ><referencevalue="#stool"/></parent><collection ><collector ><!-- in practice, collecter is almost always recorded --><referencevalue="Practitioner/f202 "/></collector><!-- the time of collection is usually required. Usually a point in time, but can be a
 period 
 (collectedPeriod) if it's a timed collection (e.g. a 24 hour urine) --><collectedDateTime value="2015年08月16日T07:03:00Z"/><!-- method is usually implied by type --><method ><coding ><system value="http://terminology.hl7.org/CodeSystem/v2-0488"/><code value="BAP"/></coding></method></collection><note ><text value="Patient dropped off specimen"/></note></Specimen>