Release 4

This page is part of the FHIR Specification (v4.0.1: R4 - Mixed Normative and STU) in it's permanent home (it will always be available at this URL). The current version which supercedes this version is 5.0.0. For a full list of available versions, see the Directory of published versions . Page versions: R4B R4 R3

Sequence-example-fda-comparisons

Clinical Genomics Work Group Maturity Level: N/A Standards Status: Informative Compartments: Patient

This is the narrative for the resource. See also the XML, JSON or Turtle format. This example conforms to the profile MolecularSequence.

Generated Narrative with Details

id: fda-vcf-comparison

coordinateSystem: 1

patient: Patient/example

ReferenceSeqs

- ReferenceSeqId Strand WindowStart WindowEnd

* NC_000001.11 (Details : {http://www.ncbi.nlm.nih.gov/nuccore code 'NC_000001.11' = 'NC_000001.11) watson 10453 101770080

Variants

- Start End ObservedAllele ReferenceAllele

* 13116 13117 T G

Qualities

- Type StandardSequence Start End Score Method TruthTP TruthFN QueryFP GtFP Precision FScore

* unknown file-BkZxBZ00bpJVk2q6x43b1YBx (Details : {https://precision.fda.gov/files/ code 'file-BkZxBZ00bpJVk2q6x43b1YBx' = 'file-BkZxBZ00bpJVk2q6x43b1YBx) 10453 101770080 5.000 VCF Comparison (Details : {https://precision.fda.gov/apps/ code 'app-BqB9XZ8006ZZ2g5KzGXP3fpq' = 'app-BqB9XZ8006ZZ2g5KzGXP3fpq) 129481 3168 1507 2186 0.9885 0.9823

Repositories

- Type Url Name

* login https://precision.fda.gov/comparisons/1850 FDA

Usage note: every effort has been made to ensure that the examples are correct and useful, but they are not a normative part of the specification.