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iangonzalez/SemDist

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#SemDist

R bioconductor package for computing semantic distance statistic for protein function predictors.

##File list/functions:

###computeIA.R : This file contains the computeIA function, which creates a file containing all of the information accretion data for the input (organism, ontology). Both inputs are strings.

###findRuMi.R : This file contains the computeMI and computeRU functions, which calculate the remaining uncertainty and misinformation for given sets of true and predicted terms in a specified ontology.

###gene2GO.R : Contains additional helper functions to load GO data.

###utilities.R : Contains helper functions to initialize package environemnts.

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R bioconductor package for computing semantic distance statistic for protein function predictors.

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