Clusters of amino acid sequences of Viridiplantae (green plants) obtained from the NCBI Reference Sequence Database. Along a phylogenetic tree, clusters were generated in Viridiplantae taxon and in each sub-taxon of Viridiplantae by using the results of all-against-all BLAST searches among the amino acid sequences. An amino acid sequence belongs to only one cluster in a taxon.
Data in "Protein (Viridiplantae)" was used.
Along a phylogenetic tree obtained from the NCBI Taxonomy Database, clusters in lower taxa (subclusters) were recursively aggregated to form clusters in a taxon (superclusters).
2,310,444 entries
| Data item | Description |
|---|---|
| Cluster ID | The cluster ID is composed of a Taxonomy ID and a serial number beginning with "0". For instance, "cluster ID: 33090.0" means the protein belongs to the cluster ranked 0th among the clusters in the "taxon: 33090". This cluster ID is uniquely-assigned by the PGDBj Ortholog Database. |
| Cluster size | Number of proteins affiliated with the Cluster |
| Supercluster | Next supercluster |
| Subcluster | Next subcluster |