Life Science Database Archive
fRNAdb

fRNAdb Summary

Data detail

info Data name fRNAdb Summary
info DOI
info Description of data contents

Functional RNA Database is a human curated catalog of functional RNAs acquired from journal papers. Each RNA is associated to a base sequence, genomic locus, putative secondary structure, citation, etc.

info Data file
File name:
frnadb_summary.zip
File size:
46.5 MB
info Simple search URL
info Data acquisition method

Main RNA information was acquired from journal papers and existing RNA databases. Computational prediction results were used for genomic loci and secondary structures. Citation information was extracted from PubMed database by searching titles/abstracts including corresponding family names.

info Data analysis method

-

info Number of data entries

510,055 entries

Data itemDescription
ID Entry ID
Accession Accession
Description Description
SO name Sequence Ontology
Organism Organism
Xref Cross Reference
Length Sequence Length
Sequence Sequence
Second Structure Thumbnail Thumbnail of RNA secondary structure image
Second Structure (PNG) RNA secondary structure image (PNG)
Second Structure (PDF) RNA secondary structure image (PDF)

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