SCORPIUS: Inferring Developmental Chronologies from Single-Cell RNA
Sequencing Data
An accurate and easy tool for performing linear trajectory inference on
single cells using single-cell RNA sequencing data. In addition, 'SCORPIUS'
provides functions for discovering the most important genes with respect to
the reconstructed trajectory, as well as nice visualisation tools.
Cannoodt et al. (2016) <doi:10.1101/079509>.
Version:
1.0.10
Depends:
R (≥ 3.5.0)
Imports:
dplyr,
dynutils (≥ 1.0.3),
dynwrap, grDevices,
ggplot2 (≥
2.0),
lmds,
MASS,
Matrix,
mclust, methods,
pbapply,
pheatmap,
princurve (≥ 2.1.4),
purrr,
ranger,
RANN,
RColorBrewer,
reshape2, stats,
tidyr,
TSP
Published:
2025年11月26日
Maintainer:
Robrecht Cannoodt <rcannood at gmail.com>
NeedsCompilation:
no
Documentation:
Downloads:
Linking:
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