GeneNMF: Non-Negative Matrix Factorization for Single-Cell Omics
A collection of methods to extract gene programs from single-cell gene expression data using non-negative matrix factorization (NMF). 'GeneNMF' contains functions to directly interact with the 'Seurat' toolkit and derive interpretable gene program signatures.
Version:
0.9.2
Depends:
R (≥ 4.3.0)
Imports:
RcppML,
Matrix, stats, methods, utils,
Seurat (≥ 4.3.0),
cluster,
lsa,
irlba,
pheatmap,
dendextend,
viridis,
colorspace
Published:
2025年09月11日
Maintainer:
Massimo Andreatta <massimo.andreatta at unige.ch>
NeedsCompilation:
no
Documentation:
Downloads:
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