Dysregulated Pathway Identification Analysis [R package DysPIA version 1.3]

DysPIA: Dysregulated Pathway Identification Analysis

It is used to identify dysregulated pathways based on a pre-ranked gene pair list. A fast algorithm is used to make the computation really fast. The data in package 'DysPIAData' is needed.

Version: 1.3

Depends: R (≥ 3.5.0), DysPIAData

Imports: Rcpp (≥ 1.0.4), BiocParallel, fastmatch, data.table, stats, parmigene

LinkingTo: Rcpp

Published: 2020年07月10日

DOI: 10.32614/CRAN.package.DysPIA

Author: Limei Wang [aut, cre], Jin Li [aut, ctb]

Maintainer: Limei Wang <lemon619 at gmail.com>

License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]

NeedsCompilation: yes

In views: Omics

CRAN checks: DysPIA results

Documentation:

Reference manual: DysPIA.html , DysPIA.pdf

Downloads:

Package source: DysPIA_1.3.tar.gz

Windows binaries: r-devel: DysPIA_1.3.zip, r-release: DysPIA_1.3.zip, r-oldrel: DysPIA_1.3.zip

macOS binaries: r-release (arm64): DysPIA_1.3.tgz, r-oldrel (arm64): DysPIA_1.3.tgz, r-release (x86_64): DysPIA_1.3.tgz, r-oldrel (x86_64): DysPIA_1.3.tgz

Old sources: DysPIA archive

Linking:

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