CytoProfile: Cytokine Profiling Analysis Tool

Provides comprehensive cytokine profiling analysis through quality control using biologically meaningful cutoffs on raw cytokine measurements and by testing for distributional symmetry to recommend appropriate transformations. Offers exploratory data analysis with summary statistics, enhanced boxplots, and barplots, along with univariate and multivariate analytical capabilities for in-depth cytokine profiling such as Principal Component Analysis based on Andrzej Maćkiewicz and Waldemar Ratajczak (1993) <doi:10.1016/0098-3004(93)90090-R>, Sparse Partial Least Squares Discriminant Analysis based on Lê Cao K-A, Boitard S, and Besse P (2011) <doi:10.1186/1471-2105年12月25日3>, Random Forest based on Breiman, L. (2001) <doi:10.1023/A:1010933404324>, and Extreme Gradient Boosting based on Tianqi Chen and Carlos Guestrin (2016) <doi:10.1145/2939672.2939785>.

Version: 0.2.2
Depends: R (≥ 4.3)
Published: 2025年09月04日
Author: Shubh Saraswat ORCID iD [cre, aut, cph], Xiaohua Douglas Zhang ORCID iD [aut]
Maintainer: Shubh Saraswat <shubh.saraswat00 at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
Language: en-US
Materials: README, NEWS
CRAN checks: CytoProfile results [issues need fixing before 2025年12月22日]

Documentation:

Reference manual: CytoProfile.html , CytoProfile.pdf

Downloads:

Windows binaries: r-devel: CytoProfile_0.2.2.zip, r-release: CytoProfile_0.2.2.zip, r-oldrel: CytoProfile_0.2.2.zip
macOS binaries: r-release (arm64): CytoProfile_0.2.2.tgz, r-oldrel (arm64): CytoProfile_0.2.2.tgz, r-release (x86_64): CytoProfile_0.2.2.tgz, r-oldrel (x86_64): CytoProfile_0.2.2.tgz

Linking:

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