Based on the algothrim proposed by Dr. Lynda Chin's lab, this package provides functions that identify chromosome regions that show gains/losses commonly observed across different samples profiled using arrayCGH platform.
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("cghMCR")
| Source | cghMCR_1.8.0.tar.gz |
|---|---|
| Windows binary | cghMCR_1.8.0.zip |
| OS X binary | cghMCR_1.8.0.tgz |
| biocViews | |
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| Depends | methods, DNAcopy, marray, arrayQuality |
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| License | LGPL |
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