limma

Linear Models for Microarray Data

Data analysis, linear models and differential expression for microarray data.

Author Gordon Smyth with contributions from Matthew Ritchie, Jeremy Silver, James Wettenhall, Natalie Thorne, Mette Langaas, Egil Ferkingstad, Marcus Davy and Francois Pepin.

Maintainer Gordon Smyth

Vignettes (Documentation)

Package Downloads

limma.pdf

usersguide.pdf

Source	limma_2.8.1.tar.gz
Windows binary	limma_2.8.1.zip
OS X binary	limma_2.8.1.tgz

Details

Imports
biocViews	Microarray , OneChannel , TwoChannel , DataImport , QualityControl , Preprocessing , Statistics , DifferentialExpression , MultipleComparisons , TimeCourse
Depends	R, methods
Suggests	affy, MASS, splines, sma, statmod, vsn
SystemRequirements
License	LGPL
URL	http://bioinf.wehi.edu.au/limma
dependsOnMe	affycoretools, affylmGUI, applera, arrayMagic, arrayQuality, beadarray, beadarraySNP, codelink, convert, limmaGUI, maDB, marray, RMAGEML, snapCGH, timecourse
suggestsMe	ABarray, GEOquery, maSigPro, OLIN, vsn